species:   Fugra
pid:       PID0948
parent:    FgmilR-7dps-14
paralog:   
locus:     NC_026474.1:8721057-8721143
matures:   ['UUGUGUCGUCACUGUCGCCAGCC', 'CUGUGAUCGACUACGACAAGC']
srr:       SRR6516244
genome:    /Users/jax/+Genomes/Fungal_genomes/Fugra.GCF_000240135.3_ASM24013v3_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Zeng2018-ds.SRR6516244.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Zeng2018-ds.SRR6516244.cram NC_026474.1:8721057-8721143

1 out of bounds
1 alignments
1 proper strand
1 stranded perfect matches

           **********************                   ************************           
CUUGUUCAACUGUGAUCGACUACGACAAGCAAAAAAAAAAAAACAGUGACCAAGAGCUUGUGUCGUCACUGUCGCCAGCCAAACGAG
((((((...(((((((.(((.((.((((((.........................)))))))).)))...)))).)))...))))))
---------------------------------------------------------UUGUGUCGUCACUGUCGCCAGCC------- l=23 a=0 c
---------CUGUGAUCGACUACGACAAGC--------------------------------------------------------- l=21 a=0 c*
------------------------------------------------------AGCUUGUGUCGUCACUGUCGCC----------- l=22 a=1 ma
-------------GAUCGACUACGACAAGCAAA------------------------------------------------------ l=20 a=0 ma*

------------------------------------------------------AGCUUGUGUCGUCACUGUCGCC----------- l=22 a=1 (ma)

mb-01011
ax-1001111
ku-01
ss-110111101110
fn-111
